Protein ZmMADS47
ZmMADS47 is a protein in the MADS family.
Information
TF Name: ZmMADS47
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS47
Uniprot ID: K7VDU8

Protein ZmMADS47

ZmMADS47 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319
Zm00001eb382780_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d046053DAPseq no logo sequence fimo position
Zm00001d046053DAPseq no logo sequence fimo position
Zm00001d046053ChIPseq no logo sequence fimo position
Zm00001d046053PChIPseq no logo sequence fimo position
Zm00001d046054DAPseq no logo sequence fimo position
Zm00001d046054DAPseq no logo sequence fimo position
Zm00001d046054ChIPseq no logo sequence fimo position
Zm00001d046054PChIPseq no logo sequence fimo position

Interactions where ZmMADS47 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS47 is the target  
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There are 92 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb382780_T001 from maize genome v5

Amino Acid Sequence
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MVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGL
AFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAGQTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRF
WWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAAPWLPLG

MVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGL
AFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAGQTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRF
WWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAAPWLPLG

MVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGL
AFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAGQTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRF
WWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAAPWLPLG

MVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGL
AFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAGQTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRF
WWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAAPWLPLG

MVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGL
AFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAGQTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRF
WWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAAPWLPLG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
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Nucleotide Sequence
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ATGGCATACATCGCGTTCGTGTTGC...

GRMZM2G099577_T01 from maize genome v3


Related TFome: pUT5599

Amino Acid Sequence
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MAYIAFVLPTQIRGGPRANQLRLQEVEQRPPPRAMVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHL
LCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGLAFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAG
QTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRFWWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAA
PWLPLG

Nucleotide Sequence
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ATGGCATACATCGCGTTCGTGTTGC...

Zm00001d046053_T001 from maize genome v4

Amino Acid Sequence
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MAYIAFVLPTQIRGGPRANQLRLQEVEQRPPPRAMVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHL
LCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGLAFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAG
QTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRFWWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAA
PWLPLG

Nucleotide Sequence
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ATGGCATACATCGCGTTCGTGTTGC...

Zm00001d046054_T001 from maize genome v4

Amino Acid Sequence
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MAYIAFVLPTQIRGGPRANQLRLQEVEQRPPPRAMVKPGKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHL
LCGAQVAIIVFKRRDPERKEVPVPPRGQRDDGGLAFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEARAG
QTEQTRALVEAEKARNDAIGQKVLQAVEVTGRRFWWEVDVGVLGEAELPVFTSQLQRLRDSVRLQANKSRTSATPAGVAA
PWLPLG

Nucleotide Sequence
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ATGGCATACATCGCGTTCGTGTTGC...


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